These are just a few external resources we find interesting. We don’t own them, can’t promise they’ll always work, and all credit goes to the original creators—please check their sites for details.
General
- 3D Slicer: https://www.slicer.org/
- AFNI: https://afni.nimh.nih.gov/
- BIDS: https://bids.neuroimaging.io/index.html
- BrainVoyager: https://www.brainvoyager.com/
- CARET: https://www.nitrc.org/projects/caret/
- CONN: https://web.conn-toolbox.org/
- Freesurfer: https://surfer.nmr.mgh.harvard.edu/
- FSL: https://fsl.fmrib.ox.ac.uk/fsl/docs/#/
- Mevislab: https://www.mevislab.de/de/
- MRIcron: https://www.nitrc.org/projects/mricron
- MRIcrogl:https://www.nitrc.org/projects/mricrogl/
- MRIqc: https://mriqc.readthedocs.io/en/latest/
- SPM: https://www.fil.ion.ucl.ac.uk/spm/software/
Anatomy
ASL
- ASL prep: https://aslprep.readthedocs.io/en/latest/
- Explore ASL: https://sites.google.com/view/exploreasl
DTI/DWI
- Explore DTI: https://www.exploredti.com/
- KULeuven – Fun With Tracts: https://github.com/KUL-Radneuron/KUL_FWT
- MRtrix: https://www.mrtrix.org/
fMRI
- fMRIprep: https://fmriprep.org/en/stable/
MRS
